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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs1512455 chr6:127868211 A/G STXBP3 chr1:109289296-109352148:+ 0.47 6.97 9.07E-11 Box Plot
UCEC rs1512456 chr6:127873356 T/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs1512458 chr6:127873677 A/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs1512461 chr6:127875637 C/A STXBP3 chr1:109289296-109352148:+ 0.47 7.1 4.47E-11 Box Plot
UCEC rs1512462 chr6:127875692 G/A STXBP3 chr1:109289296-109352148:+ 0.47 7.1 4.47E-11 Box Plot
UCEC rs1512463 chr6:127875700 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.1 4.47E-11 Box Plot
UCEC rs1512465 chr6:127877271 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.26 1.82E-11 Box Plot
UCEC rs1512466 chr6:127877282 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.26 1.82E-11 Box Plot
UCEC rs1512467 chr6:127877500 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.26 1.82E-11 Box Plot
UCEC rs1576643 chr9:32291336 C/G MYF5 chr12:81110691-81113452:+ -0.58 -7.91 5.0E-13 Box Plot
UCEC rs1581944 chr9:32294256 A/G MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1606331 chr6:127871194 A/G STXBP3 chr1:109289296-109352148:+ 0.46 7.09 4.71E-11 Box Plot
UCEC rs1606333 chr6:127872392 T/C STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs1606334 chr6:127872469 A/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs1606335 chr6:127872470 C/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot